CDS

Accession Number TCMCG016C09855
gbkey CDS
Protein Id OMO84918.1
Location complement(join(58982..59395,59817..59895,60248..60323,60404..60494,60819..60889,61190..61241,61326..61423,61526..61667))
Organism Corchorus capsularis
locus_tag CCACVL1_10560

Protein

Length 340aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009658.1
Definition hypothetical protein CCACVL1_10560 [Corchorus capsularis]
Locus_tag CCACVL1_10560

EGGNOG-MAPPER Annotation

COG_category A
Description U11 U12 small nuclear ribonucleoprotein 35 kDa
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13155        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000243        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034693        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCCGCAGCAACAACATAAACTCGGTGTTCTACGCAGAGTCGTACCATCCCATTCAGGCGGGCAGCATCGACGGCACCGACATCCTCCCCCACGATAACGCCGTTTATCGAGCTCTTCTCTGCTCCAATGCTGCCCTTTACGACCCTTTGGGCGACCCCAAGCTCATCGGCGACCCTTACCGCACCATCTTTGTCGGTCGCCTTTCTCACTTGACCACCGAGCACACCCTCCGCAAGGCAATGAGCAAATATGGCCTTGTCAAAAACTTGCGCTTAGTCCGCCACATTGTAACTGGTGCCTCCCGGGGTTATGCTTTTGTTGAGTTTGAAACCGAGAGAGACATGCGCCGTGCATATCAGGATGCTCACCATTCAATCATTGATGACTCTGAAATTATAGTTGATTATAATAGGCAACAGTTGATGCCTGGGTGGATTCCTAGAAGATTAGGAGGTGGGCTTGGTGGTAAAAAAGAGTCGGGACAACTTCGTTTTGGCGGACGAGAAAGACCCTTTAGAGCTCCCCTGCGACCAATTCCCTATGAAGATTTGAAAAAACTTGGCATTCCTCCTCCACCTGAAGGAAGATACATGTCTCGTTTTAAGGTTCCATCACCCCCTCGAAGACAAAGGATCTCAGCAGAGAGGGAAGAATTCTCTCACAAGAGGAGCTCTATGGACAGAGAAGAATTGTCCCAAAGAAGTAGCTTCACGAAGAGGGATGAGCACAAAATGACAGCAGCAGCAGGGGGGCGGCAAGAGAAATCTAGCAAAAGAAATTCTGTGGAGGAAGAAGGGCAGCATGGAGAAAGCTCTATGGATAGGTCAGCGAGTTTTCAGAAAAGGATTCCTACGGAGAGGGAGGATCACCATCATAAGCAGAGTTGTGTGGACAGAGAAGAGCACTCTCACTCCAGGAGCACTAGAGAGGGAGGAGCAATCTCTCGGAAACGGAGTTCTAAGGATAAGGAAGAAGGCTCTAGCAAGCACAGGAGACATCACAGCCGAGATCCATGGTGA
Protein:  
MSRSNNINSVFYAESYHPIQAGSIDGTDILPHDNAVYRALLCSNAALYDPLGDPKLIGDPYRTIFVGRLSHLTTEHTLRKAMSKYGLVKNLRLVRHIVTGASRGYAFVEFETERDMRRAYQDAHHSIIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYEDLKKLGIPPPPEGRYMSRFKVPSPPRRQRISAEREEFSHKRSSMDREELSQRSSFTKRDEHKMTAAAGGRQEKSSKRNSVEEEGQHGESSMDRSASFQKRIPTEREDHHHKQSCVDREEHSHSRSTREGGAISRKRSSKDKEEGSSKHRRHHSRDPW